Dokuz Eylül University Information Package / Courses Catalog

General Description

History

Ph.D. in Biotechnology was approved in the board of the Graduate School of Natural and Applied Sciences on 20.05.2013. After that the decision was approved by DEU Rectorate. The programme was approved by Turkish Higher Education Counci on 19.12.2013.

Qualification Awarded

Ph.D. in Biotechnology

Level of Qualification

Third Cycle (Doctorate Degree)

Specific Admission Requirements

Second Cycle (Master's Degree) diploma; minimum 80/100 or 3/4 Cumulative Grade Point Average, minimum score of 60 from the National Central Graduate Education Entrance Examination (ALES) in the related field; a minimum score of 70 from the graduate school entrance exam; a minimum score of 55 from the nation-wide Foreign Language Exam or equivalent score from an exam accredited by YÖK.

Specific Arrangements for Recognition of Prior Learning (Formal, Non-Formal and Informal)

According to the Regulations of Dokuz Eylül University for Graduate Schools, students may be accepted for graduate transfer with the approval of the Department Directorate and decision of the Board of Directors of the Graduate School in case the student fulfills the graduate transfer regulations decided by the General Council of the Graduate School. Previously taken courses at another graduate programme with a successful grade may be recognized by the related programmes with the written request of the students including course contents and the transcript, and by the recommendation of the Department Directorates and by the decision of the Board of Directors. The courses taken by the outgoing Exchange students may have the recognition at the school either as compulsory or elective by the decision of the Board of Directors.

Qualification Requirements and Regulations

4 years, 2 semesters per year, 16 weeks per semester, 240 ECTS in total

Profile of the Programme

In this programme, it is aimed to the acquisition of expertise in the disciplines stated in the below-mentioned Biotechnological Fields. These fields and disciplines are Microbial Biotechnology (Antibiotic Production, Ethanol Production), Enzyme Biotechnology Alternative Enzyme Purification Process, Production of Enzymes), Environmental Biotechnology (Reactor Designs, Hydrogen Production, Salt Removal from Waste Waters), Marine Biotechnology (Industrial and Medical Applications of Marine Macroalgae), Cell Culture (Endemic Plants and Anticancer-Antiapoptotic Applications), Biopolymers (Synthesis of Polymeric Absorbents, Their Biotechnological Applications) and Programme differs from eight Graduate Biotechnology Programmes currently available throughout Turkey by providing sufficiencies in terms of academic and industrial scale at the international level in the so-called areas of scientific expertise.

Students can participate in co-operative efforts with different universities in both domestically and abroad (Erasmus, foreign scholarships). Extremely positive feedbacks for our students is taken from relevant institutions.

Faculty members of Science Faculty, Chemistry Department, Biochemistry Division; Engineering Faculty, Environmental Engineering Department and Buca Faculty of Education, Chemistry Education Department are involved in interdisciplinary Biotechnology Master's Degree and substructure advantages of these institutions are taken.

Science Faculty, Chemistry Department; some of the existing facilities; UV-Vis. spectrophotometer (with thermocouple unit), electrophoresis, incubator, flow cabinet, microbial cell disruptive, blender, homogenizer, autoclave, oven, gel imaging device, phase-contrast microscopy, lyophilizator, deepfreze, chromatography column systems, western blot, water baths, refrigerators, blenders, pH meter, ion meters, ice machine, fermenter, pure water equipment, centrifuges, carbon dioxide incubator, laminated flow cabinet, microplate reader, fluorescence spectrometry, filters, atomic absorption, ultra pure water equipment, HPLC, preparative HPLC, etc.

Engineering Faculty, Environmental Engineering Department; some of the existing facilities; HPLC (with UV detector), Photometer, UV-Vis. spectrophotometer, centrifuge, incubator, laminer flow hood, pH meter, oven, GC-TCD detector, GC-FID detector, TOC analyser, activated sludge, upflow bioreactors, rotating perforated tubes biofilm reactor, two fermenter, fuel cell system, etc.

Buca Faculty of Education, Chemistry Education Department; some of the existing facilities; HPLC (with UV and IR detectors), UV-Vis. spectrophotometer (with thermocouple unit), ultra pure water equipments, voltameter, incubator, flow cabinet, homogenizer, autoclave, oven, reactor systems, automatic titrator, evaporator, fixed power supplies, deep freeze, chromatography column systems, etc.

Percentage of Courses Taught in English: 30%

Key Learning Outcomes

1	Have international level ability and productivity in academic and industrial scales for -Enzyme Biotechnology, -Microbial Biotechnology, -Environmental Biotechnology, -Marine Biotechnology, -Biomaterials/Nano-biotechnology, -Cell Culture and Enzyme/Microbial Sensors areas of Biotechnology,
2	Have sufficiency for production, research and development; creating and managing the project at national and international level in all industrial areas related to biotechnology in public and private sector with awaring of the problems in our country,
3	Open to new subjects in the field of biotechnology, aware of the problems in our country in this field and can produce strategic solutions, have entrepreneur, developer capabilities in order to create employment,
4	Have sufficiency for information and communication technologies required level of studies in the field of biotechnology,
5	Have sufficient expertise for the basic methods and techniques used in biotechnology and take on responsibility in biotechnology processes,
6	Conscious on the protection of the environment and life balance based on ethics rules in the field of biotechnology.

Occupational Profiles of Graduates with Examples

Rapid developments in the field of Biotechnology from the second half of the 20th century has also increased the need for specialized qualified human potential in this field. It is aimed within the scope of DEU., Biotechnology Master's Degree Programme that students will take part in medical as well as industrial, environmental and energy biotechnology studies with their international level expertises in science planned to be acquired. The increases in the number of specialized researcher in the field of Biotechnology in our country will play an important role for the rise of our biotechnology-based marketshare in the world by contributing the development of Research-Development activities, university-industry cooperation.

Access to Further Studies

May apply to post doctorate programmes.

Course Structure Diagram with Credits

Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
In addition to the compulsory courses of the programme, students register to elective courses appropriate for their thesis topic, on the consent of their supervisor. If necessary, on the consent of their supervisor, they can also register to courses from other programmes (from DEU or other universities). It is obligatory to register MAT5101 Applied Mathematics (3 0 0) or MAT5102 Numerical and Approximate Methods (3 0 0) with approval of the supervisor. In the case of one of these courses taken during the M.Sc. education, these are not obligatory.
T: Theoretical P: Practice L: Laboratory B: Spring Semester G: Fall Semester H: Full Year

1 .Semester:
G	0	-	ELECTIVE COURSE	ELECTIVE	-	-	-	30
TOTAL:								30

2 .Semester:
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
B	1	FBE 6666	PHILOSOPHY OF SCIENCE AND ETHICS	COMPULSORY	3	0	0	5
B	2	BYT 6098	PH.D. RESEARCH	COMPULSORY	3	0	0	9
B	0	-	ELECTIVE COURSE	ELECTIVE	-	-	-	16
TOTAL:								30

3 .Semester:
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
G	1	BYT 6094	PH.D. SEMINAR	COMPULSORY	0	3	0	5
G	2	BYT 6098	PH.D. RESEARCH	COMPULSORY	3	0	0	9
G	0	-	ELECTIVE COURSE	ELECTIVE	-	-	-	16
TOTAL:								30

4 .Semester:
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
B	1	BYT 6099	PH.D.THESIS	COMPULSORY	0	0	0	30
TOTAL:								30

5 .Semester:
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
G	1	BYT 6099	PH.D.THESIS	COMPULSORY	0	0	0	30
TOTAL:								30

6 .Semester:
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
B	1	BYT 6099	PH.D.THESIS	COMPULSORY	0	0	0	30
TOTAL:								30

7 .Semester:
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
G	1	BYT 6099	PH.D.THESIS	COMPULSORY	0	0	0	30
TOTAL:								30

8 .Semester:
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
B	1	BYT 6099	PH.D.THESIS	COMPULSORY	0	0	0	30
TOTAL:								30

FLEXIBLE ELECTIVE COURSE ACCORDING TO ECTS
Semester	No	Course Unit Code	Course Unit Title	Course Unit Type	T	P	L	ECTS
Z	1	ENV 5015	FUNDAMENTALS OF ENVIRONMENTAL BIOTECHNOLOGY - I	ELECTIVE	3	0	0	8
Z	2	BYT 6021	LIPID BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	3	MAT 5101	APPLIED MATHEMATICS	ELECTIVE	3	0	0	9
Z	4	BYM 0503	CELL CULTURE TECHNOLOGY	ELECTIVE	3	0	0	8
Z	5	BYT 6019	NANOCHEMISTRY IN SCIENCE AND TECHNOLOGY	ELECTIVE	3	0	0	8
Z	6	BYT 6017	BIOBANKS	ELECTIVE	3	0	0	8
Z	7	BYT 6015	PLANT STRESS AND BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	8	BYT 6013	RECOMBINANT TECHNIQUES IN BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	9	BYT 6011	MARINE TOXINS	ELECTIVE	3	0	0	8
Z	10	BYT 6009	NANOTECHNOLOGICAL APPLICATIONS IN ENVIRONMENTAL BIOTECHNOLOGY	ELECTIVE	2	0	0	7
Z	11	BYT 6007	CELL BASED BIOSENSORS	ELECTIVE	2	0	0	7
Z	12	BYT 6005	INDUSTRIAL PHARMACEUTICAL BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	13	BYT 6003	SOLID STATE FERMENTATION IN BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	14	BYT 6001	PRODUCTION OF PRIMARY METABOLITES	ELECTIVE	3	0	0	8
Z	15	TKS 5029	TEXTILE APPLICATIONS OF NANO AND MICRO ENCAPSULATION	ELECTIVE	1	2	0	7
Z	16	KIM 6047	BIOINORGANIC CHEMISTRY	ELECTIVE	3	0	0	7
Z	17	BYT 5017	IMMOBILIZED AFFINITY LIGAND TECHNIQUES	ELECTIVE	2	0	0	7
Z	18	BYT 5013	MARINE BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	19	BYT 5001	SEPARATION PROCESS IN BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	20	BYT 5011	IMMOBILIZED SYSTEMS AND APPLICATION AREAS	ELECTIVE	3	0	0	7
Z	21	BYT 5009	BIOSENSORS AND THEIR BASIC PRINCIPLES	ELECTIVE	3	0	0	8
Z	22	BYT 5007	BIODEGRADATION AND BIOTRANSFORMATION OF ORGANIC SUBSTANCES	ELECTIVE	2	0	0	7
Z	23	BYT 5005	HPLC IN ANALYSIS OF BIOLOGICAL MOLECULES	ELECTIVE	3	0	0	8
Z	24	ENV 5021	ADVANCES IN BIOENVIRONMENTAL ENGINEERING	ELECTIVE	2	0	0	7
Z	25	BYT 5027	MICROBIAL BIOFILMS	ELECTIVE	2	0	0	7
Z	26	BYT 6006	BIOETHICS AND BIOSAFETY	ELECTIVE	2	0	0	7
Z	27	EEE 5076	BIOMEDICAL SIGNAL PROCESSING	ELECTIVE	3	0	0	8
Z	28	BYT 6002	PRODUCTION OF SECONDARY METABOLITES	ELECTIVE	3	0	0	9
Z	29	BYT 5018	BIONANOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	30	BYT 6020	PROBLEM- BASED LEARNING IN BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	31	ENV 5060	COMPUTER ASSISTED DESIGN AND ANALYSIS OF EXPERIMENTS	ELECTIVE	3	0	0	6
Z	32	BYT 5020	BIODEGRADATION AND INHIBITION KINETICS IN ANAEROBIC AND AEROBIC ENVIRONMENTS	ELECTIVE	2	0	0	8
Z	33	BYT 5008	APPLICATION OF BIOSENSORS	ELECTIVE	2	0	0	7
Z	34	BYT 5004	INDUSTRIAL BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	35	BYM 0546	CELL AND TISSUE ENGINEERING	ELECTIVE	3	0	0	8
Z	36	MAT 5102	NUMERICAL AND APPROXIMATE METHODS	ELECTIVE	3	0	0	9
Z	37	BYT 6018	BIOFUEL PRODUCTION	ELECTIVE	2	0	0	7
Z	38	BYT 5012	MICROALGAE: BIOTECHNOLOGY AND MICROBIOLOGY	ELECTIVE	3	0	0	9
Z	39	BYT 5002	MICROBIAL BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	40	BYT 5010	MICROBIAL CELL IMMOBILIZATION	ELECTIVE	3	0	0	8
Z	41	BYT 5006	ENZYMES IN BIOMASS CONVERSION	ELECTIVE	3	0	0	8
Z	42	BYT 6016	FUNCTIONS AND BIOTECHNOLOGY OF PLANT SECONDARY METABOLITES	ELECTIVE	3	0	0	8
Z	43	BYT 6014	STEM CELLS AND APPLICATIONS	ELECTIVE	3	0	0	8
Z	44	BYT 6012	NANOMATERIALS AND BIOTECHNOLOGICAL APPLICATIONS	ELECTIVE	3	0	0	8
Z	45	ENV 5024	NOVEL BIOPROCESSES FOR WASTE TREATMENT	ELECTIVE	2	0	0	4
Z	46	BYT 6010	BIOSORPTION; ITS ISOTHERMS, KINETICS AND THERMODYNAMICS	ELECTIVE	2	0	0	7
Z	47	ENV 5016	FUNDAMENTALS OF ENVIRONMENTAL BIOTECHNOLOGY - II	ELECTIVE	3	0	0	9
Z	48	BYT 6008	PLANT BIOTECHNOLOGY	ELECTIVE	3	0	0	8
Z	49	BYT 6004	LIGNOCELLULOSE BIOTECHNOLOGY	ELECTIVE	2	0	0	7

Examination Regulations, Assessment and Grading

Related items of Dokuz Eylül University Regulations of Graduate Education and Exams and related items of Institute of Natural and Applied Sciences Regulations of Education and Code of Practicing Exams are applied for the exams and course grades.
The course evaluation criteria are defined for each course by the instructor(s) of the corresponding course and are given in the Course Description Form found in the information package

Graduation Requirements

Third Cycle (Doctor of Philosophy) Programme is comprised of courses (at least 67 ECTS),Ph.D.Seminar (5 ECTS), Ph. D. Research (18 ECTS) / Ph. D. Thesis (150 ECTS) courses, thesis proposal, doctoral qualifying examination and thesis examination with a total credit of 240 ECTS. Students must have minimum Cumulative Grade Point Average (CGPA) of 2.50 / 4.00 and completed all the courses with at least CB / S / TP grades.

Mode of Study (Full-Time, Part-Time, E-Learning )

Full-time

Programme Director or Equivalent

Prof. Dr. Levent ÇAVAŞ (Head of Biotechnology Department)
Dokuz Eylul University, Science Faculty, Chemistry Department Tınaztepe, Izmir, 35390
E-mail: lcavas@deu.edu.tr
Phone: 0 (232) 301 87 01

DEGREE PROGRAMMES