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Description of Individual Course Units

Course Unit Code Course Unit Title Type Of Course D U L ECTS BST 6002 BIOLOGICAL DATA INTEGRATION ELECTIVE 3 0 0 12

Offered By

Biomedicine and Health Technologies

Level of Course Unit

Third Cycle Programmes (Doctorate Degree)

Course Coordinator

ASSISTANT PROFESSOR ATHANASIA PAVLOPOULOU

Offered to

Biomedicine and Health Technologies

Course Objective

To apply computational methods for integrating and processing biological data.

Learning Outcomes of the Course Unit

Mode of Delivery

Face -to- Face

Prerequisites and Co-requisites

None

Recomended Optional Programme Components

None

Course Contents

Week Subject Description 1 Introduction 2 Biological Databases 3 Biological Networks I 4 Biological Networks II 5 Gene Ontology inference 6 Gene function prediction 7 Gene prioritization 8 Midterm 9 Gene expression data analysis 10 Comparative genomics 11 Proteomics data analysis 12 Protein function prediction 13 Drug repurposing 14 Statistical analysis I 15 Statistical analysis II 16 Final Exam

Recomended or Required Reading

To be announced.

Planned Learning Activities and Teaching Methods

Assessment Methods

SORTING NUMBER SHORT CODE LONG CODE FORMULA 1 ASG ASSIGNMENT 2 MTE MIDTERM EXAM 3 FIN FINAL EXAM 4 FCG FINAL COURSE GRADE ASG * 0.30 + MTE * 0.30 + FIN * 0.40 5 RST RESIT 6 FCGR FINAL COURSE GRADE (RESIT) ASG * 0.30 + MTE * 0.30 + RST * 0.40 *** Resit Exam is Not Administered in Institutions Where Resit is not Applicable.

Further Notes About Assessment Methods

None

Assessment Criteria

To be announced.

Language of Instruction

English

Course Policies and Rules

To be announced.

Contact Details for the Lecturer(s)

athanasia.pavlopoulou@deu.edu.tr

Office Hours

To be announced.

Work Placement(s)

None

Workload Calculation

Activities Number Time (hours) Total Work Load (hours) Lectures 14 3 42 Preparations before/after weekly lectures 14 8 112 Preparation for midterm exam 1 20 20 Preparation for final exam 1 25 25 Preparing assignments 2 30 60 Preparing presentations 1 35 35 Midterm 1 5 5 Final 1 5 5 TOTAL WORKLOAD (hours) 304

Contribution of Learning Outcomes to Programme Outcomes

PO/LO PO.1 PO.2 PO.3 PO.4 PO.5 PO.6 PO.7 PO.8