Dokuz Eylül University Information Package / Courses Catalog

Description of Individual Course Units

Course Unit Code	Course Unit Title	Type Of Course	D	U	L	ECTS
BIO 5024	BASIC LABORATORY PRINCIPLES AND METHODS II	ELECTIVE	2	2	0	9

Offered By

The Institute Of Health Sciences

Level of Course Unit

Second Cycle Programmes (Master's Degree)

Course Coordinator

PROFESSOR DOCTOR GÜL HÜRAY IŞLEKEL

Offered to

Medical Biology and Genetics
Clinical Neuroscience (Non-Thesis)
Radiopharmaceutical Sciences
Biophysics
The Institute Of Health Sciences
Microbiology
Biomechanics
Molecular Medicine
Basic Nuclear Medicine
Anatomy
Laboratory Medicine
Medical Physics
Medical informatics Scientific Preparatory (Msc)
Medical Parasitology
Biochemistry
Experimantal Fetal Surgery
Pharmacology
Toxicology

Course Objective

The purpose of this course is to teach advanced laboratory principles and related laboratory procedures. The course consists of theory and practice sections. In theoretical section of the course, the basic principles and procedures regarding the method are given.
In the implementation stage of the course, the students both make hands on experiments and observe the running of the biological samples in the laboratory. In the scope of this course LC-MS/MS, GC_MS/MS, IEF, nephelometry, turbidimetry, ELISA etc. Techniques are taught to the students. The students write the procedure and the results on their lab notebook which is evaluated at the end of the semester.

Learning Outcomes of the Course Unit

1	Be acquired the knowledge about the basic biochemistry and basic chemistry which are the main areas of biochemistry.
2	Be grasped the theoretical knowledge about the basic biochemistry and basic chemistry which are the main areas of biochemistry.
3	Have the knowledge about the principles and methods of basic laboratory equipments.
4	Be able to critically analyze the basic concepts of basic laboratory methods
5	Synthesis: Be able to discuss the learned methods by considering different ways and be able to adapt to new situations
6	Be able to present by explicating the results of one of the applied methods.

Mode of Delivery

Face -to- Face

Prerequisites and Co-requisites

None

Recomended Optional Programme Components

None

Course Contents

Week	Subject	Description
1	Introduction, Course Introduction
2	Liquid Chromatography (HPLC)
3	Liquid Chromatography (HPLC)
4	RIA, ELISA
5	GC-MS
6	Basic principles of Electrophoresis
7	Capillary Electrophoresis
8	IEF
9	IEF
10	Basic Principles and Applications of Atomic Absorbtion Spectrophotometer;
11	Basic Principles of Liquid Chromatography Tandem Mass Spectometry, application
12	Quantitation in MRM mode with Liquid Chromatography Tandem Mass Spectometry
13	Introduction to proteomics
14	Applications of proteomics in medicine

Recomended or Required Reading

Textbook(s):
1. DNA Repair and mutagenesis, Errol C. Friedberg, Graham C. Walker, Wolfram Siede,Richard D. Wood, Roger A.Schultz and Tom Ellenberger Second Edition ASM Press, Washington DC, 2006
2. Mass Spectrometry, Edmond deHoffmann and Vincent Stroobant Second Edition John Wiley, Chichester, 2002,
3. Tietz: Klinik Kimyada Temel Ilkeler Beşinci Baskı. (Editörler: Burtis & Ashwood) (Çeviri Editörü: Diler Aslan).PALMY yayıncılık, pp.352-387.

Planned Learning Activities and Teaching Methods

This course consists of theory and practical sections. In theoretical section of the course, the basic principles and procedures regarding the methoda are given. In practical section the students the students both make hands on experiments and observe the running of the biological samples in the laboratory. The students write the procedure and the results on their lab notebook which is evaluated at the end of the semester.

Assessment Methods

SORTING NUMBER	SHORT CODE	LONG CODE	FORMULA
1	ASG	ASSIGNMENT
2	FIN	FINAL EXAM
3	FCG	FINAL COURSE GRADE	ASG * 0.30 + FIN* 0.70
4	RST	RESIT
5	FCGR	FINAL COURSE GRADE (RESIT)	ASG * 0.30 + RST* 0.70

*** Resit Exam is Not Administered in Institutions Where Resit is not Applicable.

Further Notes About Assessment Methods

None

Assessment Criteria

Comprehension, learning, analysis, comparison, applications, interactive participation

Language of Instruction

Turkish

Course Policies and Rules

To be announced.

Contact Details for the Lecturer(s)

e-mail : huray.islekel@deu.edu.tr Telefon: 412 44 08

Office Hours

Friday 12.30-13:30

Work Placement(s)

None

Workload Calculation

Activities	Number	Time (hours)	Total Work Load (hours)
Lectures	14	3	42
Tutorials	14	2	28
Preparations before/after weekly lectures	14	3	42
Preparation for final exam	1	35	35
Preparing presentations	1	25	25
Preparing assignments	2	25	50
Final	1	3	3
TOTAL WORKLOAD (hours)			225

Contribution of Learning Outcomes to Programme Outcomes

PO/LO	PO.1	PO.2	PO.3	PO.4	PO.5	PO.6	PO.7	PO.8	PO.9	PO.10	PO.11	PO.12
LO.1	3	4	5	3	4	4	4	5	3	2	3	4
LO.2	4	5	5	2	3	4	4	5	3	3	3	3
LO.3	4	5	5	3	3	4	5	5	3	2	3	4
LO.4	4	5	5	3	3	5	5	5	3	3	3	5
LO.5	4	4	4	2	3	4	4	4	3	2	2	4
LO.6	5	5	5	3	5	4	4	4	4	4	3	4

COURSE UNIT TITLE

DEGREE PROGRAMMES

Description of Individual Course Units

Offered By

Level of Course Unit

Course Coordinator

Offered to

Course Objective

Learning Outcomes of the Course Unit

Mode of Delivery

Prerequisites and Co-requisites

Recomended Optional Programme Components

Course Contents

Recomended or Required Reading

Planned Learning Activities and Teaching Methods

Assessment Methods

Further Notes About Assessment Methods

Assessment Criteria

Language of Instruction

Course Policies and Rules

Contact Details for the Lecturer(s)

Office Hours

Work Placement(s)

Workload Calculation

Contribution of Learning Outcomes to Programme Outcomes

CONTACT INFORMATION